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Olamide Isreal 42d4e6cb87 Add WES pipeline configuration for pocketminer 
- Add Nextflow pipeline (main.nf) with Harbor container image
- Add nextflow.config with k8s/k8s_gpu/standard profiles
- Add params.json for TRS/WES parameter discovery
- Add Dockerfile, entrypoint.py, meta.yml from original implementation
- Update paths to use /omic/eureka/Pocketminer/ convention
- Update .gitignore to allow params.json
2026-03-23 13:27:40 +01:00
.gitignore
Add WES pipeline configuration for pocketminer
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Dockerfile
Add WES pipeline configuration for pocketminer
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entrypoint.py
Add WES pipeline configuration for pocketminer
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main.nf
Add WES pipeline configuration for pocketminer
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Makefile
Add WES pipeline configuration for pocketminer
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meta.yml
Add WES pipeline configuration for pocketminer
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nextflow.config
Add WES pipeline configuration for pocketminer
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params.json
Add WES pipeline configuration for pocketminer
2026-03-23 13:27:40 +01:00
README.md
Update file README.md
2025-12-17 00:49:56 +00:00

README.md

#Readme

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Description
PocketMiner - protein binding pocket prediction
Readme 59 KiB
Languages
Python 59.5%
Nextflow 22.1%
Makefile 11.5%
Dockerfile 6.9%