9e75f44f1a
Source-only snapshot of the cluster branch for WES execution. Large reference files (HPA/MANE/ensemble FASTA, model weights, ~597 MB) are omitted: they are baked into the container images at build time and mounted from the dreamdock-data PVC at runtime, and exceed the Gitea request size limit. Pipeline entry point is main.nf, which orchestrates the biotransformer, conplex and tissue modules as a single workflow. Ligand inputs are read from the eureka workspace; protein_zarr and chembl_db come from the dreamdock-data PVC.
21 lines
565 B
YAML
21 lines
565 B
YAML
version: '3.8'
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services:
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tissue:
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build:
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context: .
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dockerfile: Dockerfile_tissue
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image: harbor.cluster.omic.ai/omic/digitaltrials/tissue:1.1.1
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chembl:
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build:
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context: .
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dockerfile: Dockerfile_chembl
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image: harbor.cluster.omic.ai/omic/digitaltrials/chembl:1.0.0
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network:
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build:
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context: .
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dockerfile: Dockerfile_network
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image: harbor.cluster.omic.ai/omic/digitaltrials/network:1.0.0
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volumes:
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- /data/bugra/digital_trials/work/48/1e78bc2c0d60c8f0e72800d6226604:/workdir
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- /data/:/data |