73e2eea4be12ac94b38c55359195799ba2c4cf17
GET_FINAL_METABOLITES_STATIC took chembl_db as a `path` input, so Nextflow copied the ~9.2 GB SQLite DB into each task's work directory. With ~29 concurrent tasks that is hundreds of GB of I/O, against a process that also declared only 1 GB of memory. Every task failed with exit 1 and retried ten times, producing 746 errors and an empty 1b_final_metabolites/ output. Pass the DB as a `val` path instead so tasks read it in place from the dreamdock-data PVC, and give the process parameterised growing memory.
Description
Digital Trials Nextflow pipeline: metabolite prediction (BioTransformer), proteome screening (ConPLex), tissue distribution
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