omic
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  • Joined on 2025-10-06
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omic pushed to main at omic/immunebuilder 2026-03-16 14:32:05 +00:00
8887cbe592 Configure ImmuneBuilder pipeline for WES execution
omic created branch main in omic/immunebuilder 2026-03-16 14:32:05 +00:00
omic pushed to main at omic/flowdock 2026-03-16 14:28:58 +00:00
23e37ae808 Remove --gpus all from docker runOptions
omic pushed to main at omic/flowdock 2026-03-16 14:28:28 +00:00
da8af7bbc3 Remove --gpus all from containerOptions - WES handles GPU via engine_params
omic pushed to main at omic/flowdock 2026-03-16 14:23:48 +00:00
a3ffec6a07 Initial commit: FlowDock pipeline configured for WES execution
omic created branch main in omic/flowdock 2026-03-16 14:23:48 +00:00
omic created repository omic/immunebuilder 2026-03-16 14:23:16 +00:00
omic created repository omic/flowdock 2026-03-16 14:19:55 +00:00
omic pushed to master at omic/chai-lab 2026-03-16 12:58:41 +00:00
6fd165b619 Fix Dockerfile verification: use generic transformers import check
omic pushed to master at omic/chai-lab 2026-03-16 12:40:03 +00:00
895f3c5f75 Pin transformers<5.0 for EsmModel compatibility
omic pushed to master at omic/chai-lab 2026-03-16 12:24:42 +00:00
5ac0bfc25e Optimize Dockerfile: use pytorch base image to reduce size
omic pushed to master at omic/chai-lab 2026-03-16 12:09:24 +00:00
7fbabfee39 Update input/output paths to match DRS workspace (s3://omic/eureka/chai1)
omic pushed to master at omic/chai-lab 2026-03-16 11:55:18 +00:00
f971fd0e21 Initial commit: Chai-1 protein structure prediction pipeline for WES
omic created branch master in omic/chai-lab 2026-03-16 11:55:18 +00:00
omic created repository omic/chai-lab 2026-03-16 11:52:55 +00:00