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De-lint tests.

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This commit is contained in:
Nathan Baker
2020-05-25 14:44:53 -07:00
parent d30705d490
commit 75cdf0ea04
2 changed files with 20 additions and 16 deletions
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11
tests/test_basic_regression.py
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@@ -100,8 +100,8 @@ def compare_output(pdb, tmp_path, ref_path):
elif line.startswith("---"):
at_pka = False
else:
m = re.search(r'([0-9]+\.[0-9]+)', line)
value = float(m.group(0))
match = re.search(r'([0-9]+\.[0-9]+)', line)
value = float(match.group(0))
test_data.append(value)
errstr = "Error exceeds maximum allowed value (%d decimal places)" % MAX_ERR_DECIMALS
assert_almost_equal(test_data, ref_data, decimal=MAX_ERR_DECIMALS,
@@ -113,9 +113,10 @@ def compare_output(pdb, tmp_path, ref_path):
pytest.param('1HPX', [], id="1HPX: no options"),
pytest.param('4DFR', [], id="4DFR: no options"),
pytest.param('3SGB', [], id="3SGB: no options"),
pytest.param('3SGB-subset', ["--titrate_only",
"E:17,E:18,E:19,E:29,E:44,E:45,E:46,E:118,E:119,E:120,E:139"],
id="3SGB: --titrate_only"),
pytest.param('3SGB-subset', [
"--titrate_only",
"E:17,E:18,E:19,E:29,E:44,E:45,E:46,E:118,E:119,E:120,E:139"],
id="3SGB: --titrate_only"),
pytest.param('1HPX-warn', ['--quiet'], id="1HPX-warn: --quiet")])
def test_regression(pdb, options, tmp_path):
"""Basic regression test of PROPKA functionality."""

25
tests/test_hybrid36.py
View File

@@ -1,9 +1,13 @@
"""Test the hybrid36 module."""
import unittest
import propka.hybrid36 as hybrid36
class Hybrid36Test(unittest.TestCase):
def testDecode(self):
"""Test class for hybrid36."""
def test_decode(self):
"""Test decoding functions."""
test_values = {
"99999": 99999,
"A0000": 100000,
@@ -37,11 +41,11 @@ class Hybrid36Test(unittest.TestCase):
"A001Z": 100071,
"B0000": 1779616,
}
for key, value in test_values.items():
self.assertEqual(hybrid36.decode(key), value)
for k, v in test_values.items():
self.assertEqual(hybrid36.decode(k), v)
def testErrors(self):
def test_errors(self):
"""Test values that should raise errors."""
test_values = [
"99X99",
"X9-99",
@@ -50,8 +54,7 @@ class Hybrid36Test(unittest.TestCase):
"-",
"!NotOk",
]
for v in test_values:
with self.assertRaises(ValueError) as e:
hybrid36.decode(v)
self.assertTrue(v in str(e.exception))
for value in test_values:
with self.assertRaises(ValueError) as err:
hybrid36.decode(value)
self.assertTrue(value in str(err.exception))