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Fix getpwuid error: add UID 1000 user for k8s compatibility

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Olamide Isreal
2026-03-26 15:33:25 +01:00
parent e172ccc453
commit f9223922db
1 changed files with 3 additions and 0 deletions
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Dockerfile.wes
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@@ -11,6 +11,9 @@ WORKDIR /opt/bioemu
RUN python3 -m pip install --upgrade pip && \ RUN python3 -m pip install --upgrade pip && \
pip install --no-cache-dir bioemu mdtraj scikit-learn pandas matplotlib seaborn pip install --no-cache-dir bioemu mdtraj scikit-learn pandas matplotlib seaborn
# Add user entry for UID 1000 (k8s default) to avoid getpwuid errors
RUN useradd -u 1000 -m -s /bin/bash nextflow || true
RUN mkdir -p /opt/bioemu/scripts/ /data /results && chmod -R 777 /data /results RUN mkdir -p /opt/bioemu/scripts/ /data /results && chmod -R 777 /data /results
COPY calculate_gibbs.py /opt/bioemu/scripts/ COPY calculate_gibbs.py /opt/bioemu/scripts/