diff --git a/Dockerfile.wes b/Dockerfile.wes index be21812..84f40a2 100644 --- a/Dockerfile.wes +++ b/Dockerfile.wes @@ -11,6 +11,9 @@ WORKDIR /opt/bioemu RUN python3 -m pip install --upgrade pip && \ pip install --no-cache-dir bioemu mdtraj scikit-learn pandas matplotlib seaborn +# Add user entry for UID 1000 (k8s default) to avoid getpwuid errors +RUN useradd -u 1000 -m -s /bin/bash nextflow || true + RUN mkdir -p /opt/bioemu/scripts/ /data /results && chmod -R 777 /data /results COPY calculate_gibbs.py /opt/bioemu/scripts/