Fix getpwuid error: add UID 1000 user for k8s compatibility

2026-03-26 15:33:25 +01:00
parent e172ccc453
commit f9223922db
1 changed files with 3 additions and 0 deletions
--- a/Dockerfile.wes
+++ b/Dockerfile.wes
@@ -11,6 +11,9 @@ WORKDIR /opt/bioemu
 RUN python3 -m pip install --upgrade pip && \
    pip install --no-cache-dir bioemu mdtraj scikit-learn pandas matplotlib seaborn

+# Add user entry for UID 1000 (k8s default) to avoid getpwuid errors
+RUN useradd -u 1000 -m -s /bin/bash nextflow || true
+
 RUN mkdir -p /opt/bioemu/scripts/ /data /results && chmod -R 777 /data /results

 COPY calculate_gibbs.py /opt/bioemu/scripts/