Fixed patient generation with separate script approach

test_synthea.sh

@@ -0,0 +1,21 @@
+#!/bin/bash
+
+# Set up environment and variables
+MODULE_NAME="diabetes"
+JSON_PATH="$(pwd)/modules/${MODULE_NAME}.json"
+
+# Make sure we have the module file
+if [ ! -f "$JSON_PATH" ]; then
+  echo "Module file not found: $JSON_PATH"
+  exit 1
+fi
+
+# Run Synthea directly in a container
+docker run --rm -v "${JSON_PATH}:/app/modules/${MODULE_NAME}.json" \
+  -v "$(pwd)/test_output:/app/output" \
+  synthea-module-generator \
+  bash -c "cd /app && ./run_synthea -p 10 -g B -m ${MODULE_NAME} -a 0-90 -s 12345 | tee /app/output/synthea_run.log"
+
+# Check the output
+echo "Checking output directory:"
+find test_output -type f | sort