From bf7728d976f7ccc9ad6acfec827ad16b523ae6f3 Mon Sep 17 00:00:00 2001
From: Olamide Isreal <olamide@omicmd.com>
Date: Tue, 24 Mar 2026 21:08:54 +0100
Subject: [PATCH] Add k8s executor and storage config to nextflow.config

---
 nextflow.config | 9 ++++++++-
 1 file changed, 8 insertions(+), 1 deletion(-)

diff --git a/nextflow.config b/nextflow.config
index c89b5a2..334c768 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -25,7 +25,14 @@ profiles {
     }
     k8s {
         process {
-            container = 'harbor.cluster.omic.ai/omic/propka:latest'
+            executor = 'k8s'
+        }
+        docker {
+            enabled = true
+        }
+        k8s {
+            storageClaimName = 'eureka-pvc'
+            storageMountPath = '/omic/eureka'
         }
     }
 }