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Merge pull request #76 from Becksteinlab/coverage-updates

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coverage updates
This commit is contained in:
Nathan Baker
2020-06-27 08:43:05 -07:00
committed by GitHub
parent bd5c8f1aa1 d710ca9679
commit 6d0a07bb1e
2 changed files with 3 additions and 1 deletions
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2
.github/workflows/python-package.yml vendored
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@@ -37,7 +37,7 @@ jobs:
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest and coverage - name: Test with pytest and coverage
run: | run: |
coverage run -m pytest coverage run --source=propka -m pytest
coverage report -m | tee coverage.txt coverage report -m | tee coverage.txt
coverage html coverage html
- name: Upload coverage to https://codecov.io/gh/jensengroup/propka - name: Upload coverage to https://codecov.io/gh/jensengroup/propka

2
README.md
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@@ -1,6 +1,8 @@
# PROPKA 3 # PROPKA 3
![Tests](https://github.com/jensengroup/propka/workflows/Tests/badge.svg) ![Tests](https://github.com/jensengroup/propka/workflows/Tests/badge.svg)
![codecov](https://codecov.io/gh/jensengroup/propka/branch/master/graph/badge.svg)](https://codecov.io/gh/jensengroup/propka)
[![PyPI version](https://badge.fury.io/py/propka.svg)](https://badge.fury.io/py/propka)
PROPKA predicts the pKa values of ionizable groups in proteins PROPKA predicts the pKa values of ionizable groups in proteins
(version 3.0) and protein-ligand complexes (version 3.1 and later) (version 3.0) and protein-ligand complexes (version 3.1 and later)