Initial removal of PROPKA input
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@@ -38,8 +38,6 @@ def run_propka_stream(options, input_file, filename):
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molecule = read_molecule_file(filename, molecule, stream=input_file)
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molecule.calculate_pka()
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molecule.write_pka()
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if args.generate_propka_input:
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molecule.write_propka()
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@pytest.mark.parametrize("pdb, options", [
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