diff --git a/Source/atom.py b/Source/atom.py index c964930..dc9470b 100644 --- a/Source/atom.py +++ b/Source/atom.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import string, Source.lib, Source.group diff --git a/Source/bonds.py b/Source/bonds.py index d9da657..6859ef3 100644 --- a/Source/bonds.py +++ b/Source/bonds.py @@ -1,4 +1,7 @@ + from __future__ import division +from __future__ import print_function + import pickle,sys,os,math,Source.calculations diff --git a/Source/calculations.py b/Source/calculations.py index ae71054..07dd574 100644 --- a/Source/calculations.py +++ b/Source/calculations.py @@ -1,5 +1,7 @@ from __future__ import division +from __future__ import print_function + import math, Source.protonate, Source.bonds,copy, sys diff --git a/Source/conformation_container.py b/Source/conformation_container.py index f042192..1cf9c21 100644 --- a/Source/conformation_container.py +++ b/Source/conformation_container.py @@ -3,6 +3,8 @@ # from __future__ import division +from __future__ import print_function + import Source.group, Source.determinants, Source.determinant, Source.ligand, Source.output, Source.coupled_groups, functools class Conformation_container: diff --git a/Source/coupled_groups.py b/Source/coupled_groups.py index 5be0513..2ee80e6 100644 --- a/Source/coupled_groups.py +++ b/Source/coupled_groups.py @@ -1,5 +1,7 @@ from __future__ import division +from __future__ import print_function + import math, Source.output, Source.group, Source.lib, itertools diff --git a/Source/determinant.py b/Source/determinant.py index 3be7a02..5085ca1 100644 --- a/Source/determinant.py +++ b/Source/determinant.py @@ -1,4 +1,7 @@ +from __future__ import division +from __future__ import print_function + class Determinant: """ Determinant class - set up for later structurization diff --git a/Source/determinants.py b/Source/determinants.py index 8f2dc60..df8b66e 100644 --- a/Source/determinants.py +++ b/Source/determinants.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import math, time import Source.iterative, Source.lib, Source.vector_algebra diff --git a/Source/group.py b/Source/group.py index 99fabaf..56a237d 100644 --- a/Source/group.py +++ b/Source/group.py @@ -3,6 +3,8 @@ # from __future__ import division +from __future__ import print_function + import Source.ligand, Source.determinant, Source.ligand_pka_values, math, Source.protonate my_protonator = Source.protonate.Protonate(verbose=False) diff --git a/Source/iterative.py b/Source/iterative.py index c994867..884d39b 100644 --- a/Source/iterative.py +++ b/Source/iterative.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import math, time import Source.lib as lib from Source.determinant import Determinant diff --git a/Source/lib.py b/Source/lib.py index 43b471d..6e11a07 100755 --- a/Source/lib.py +++ b/Source/lib.py @@ -1,5 +1,8 @@ #!/usr/bin/python +from __future__ import division +from __future__ import print_function + import string, sys, copy, math, os diff --git a/Source/ligand.py b/Source/ligand.py index d745d51..3060b61 100755 --- a/Source/ligand.py +++ b/Source/ligand.py @@ -1,5 +1,8 @@ #!/usr/bin/python +from __future__ import division +from __future__ import print_function + import sys, Source.calculations from Source.vector_algebra import * diff --git a/Source/ligand_pka_values.py b/Source/ligand_pka_values.py index 591a77c..98a3a14 100644 --- a/Source/ligand_pka_values.py +++ b/Source/ligand_pka_values.py @@ -1,5 +1,8 @@ #!/usr/bin/env python +from __future__ import division +from __future__ import print_function + import Source.molecular_container, Source.calculations, Source.calculations, Source.parameters, Source.pdb, Source.lib, os, subprocess, sys class ligand_pka_values: diff --git a/Source/molecular_container.py b/Source/molecular_container.py index e95be4c..e6df03e 100755 --- a/Source/molecular_container.py +++ b/Source/molecular_container.py @@ -4,6 +4,7 @@ # # from __future__ import division +from __future__ import print_function import os, Source.pdb, sys, Source.version, Source.output, Source.conformation_container, Source.group, Source.lib class Molecular_container: diff --git a/Source/output.py b/Source/output.py index 16a97e1..b944442 100644 --- a/Source/output.py +++ b/Source/output.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import sys import Source.lib diff --git a/Source/parameters.py b/Source/parameters.py index 80d50f1..2dfafff 100644 --- a/Source/parameters.py +++ b/Source/parameters.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import math import Source.lib as lib import sys, os diff --git a/Source/pdb.py b/Source/pdb.py index d0a3bfa..01b37a3 100644 --- a/Source/pdb.py +++ b/Source/pdb.py @@ -1,3 +1,7 @@ + +from __future__ import division +from __future__ import print_function + import string, sys, copy, Source.lib from Source.atom import Atom from Source.conformation_container import Conformation_container diff --git a/Source/protonate.py b/Source/protonate.py index fcc46e4..7d26344 100755 --- a/Source/protonate.py +++ b/Source/protonate.py @@ -1,6 +1,7 @@ #!/usr/bin/python from __future__ import division +from __future__ import print_function from Source.vector_algebra import * import Source.bonds, Source.pdb, Source.atom diff --git a/Source/vector_algebra.py b/Source/vector_algebra.py index 0603ce9..0b9f0bb 100644 --- a/Source/vector_algebra.py +++ b/Source/vector_algebra.py @@ -1,3 +1,5 @@ +from __future__ import division +from __future__ import print_function import math class vector: diff --git a/Source/version.py b/Source/version.py index 5a5f603..07ec22c 100644 --- a/Source/version.py +++ b/Source/version.py @@ -1,3 +1,5 @@ +from __future__ import division +from __future__ import print_function import math import Source.lib as lib import sys, os diff --git a/Tests/runtest.py b/Tests/runtest.py index 7bcef10..8f7710e 100755 --- a/Tests/runtest.py +++ b/Tests/runtest.py @@ -2,6 +2,9 @@ """ Run test for test pdbs """ +from __future__ import division +from __future__ import print_function + from subprocess import call import os, re import sys