Olamide Isreal
42d4e6cb87
- Add Nextflow pipeline (main.nf) with Harbor container image - Add nextflow.config with k8s/k8s_gpu/standard profiles - Add params.json for TRS/WES parameter discovery - Add Dockerfile, entrypoint.py, meta.yml from original implementation - Update paths to use /omic/eureka/Pocketminer/ convention - Update .gitignore to allow params.json
38 lines
284 B
Plaintext
38 lines
284 B
Plaintext
# Nextflow
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.nextflow/
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.nextflow.log*
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work/
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results/
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*.html
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# Python
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__pycache__/
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*.py[cod]
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*$py.class
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*.so
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.Python
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*.egg-info/
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dist/
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build/
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# Data
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*.pdb
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*.npy
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output/
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data/
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# IDE
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.vscode/
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.idea/
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*.swp
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*.swo
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# Docker
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.dockerignore
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# Models (large files)
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models/
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*.ckpt
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*.h5
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*.pkl
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