manifest {
    name = 'pocketminer-Nextflow'
    author = 'Olamide'
    homePage = 'https://github.com/Mickdub/gvp'
    description = 'Nextflow pipeline for PocketMiner - cryptic binding pocket prediction using geometric deep learning'
    mainScript = 'main.nf'
    version = '1.0.0'
}

params {
    pdb = "s3://omic/eureka/Pocketminer/1HSG.pdb"
    outdir = "s3://omic/eureka/Pocketminer/output"
    debug = false
}

profiles {
    standard {
        docker {
            enabled = true
            temp = 'auto'
        }
    }

    k8s {
        process {
            executor = 'k8s'
            container = 'harbor.cluster.omic.ai/omic/pocketminer:v2'
        }
        docker {
            enabled = true
        }
    }
}

process {
    cpus = 2
    memory = '8 GB'
}