biopython==1.79 filelock==3.13.1 fsspec==2024.3.1 Jinja2==3.1.3 MarkupSafe==2.1.5 mpmath==1.3.0 networkx==3.2.1 numpy==1.23.5 nvidia-cublas-cu12==12.1.3.1 nvidia-cuda-cupti-cu12==12.1.105 nvidia-cuda-nvrtc-cu12==12.1.105 nvidia-cuda-runtime-cu12==12.1.105 nvidia-cudnn-cu12==8.9.2.26 nvidia-cufft-cu12==11.0.2.54 nvidia-curand-cu12==10.3.2.106 nvidia-cusolver-cu12==11.4.5.107 nvidia-cusparse-cu12==12.1.0.106 nvidia-nccl-cu12==2.19.3 nvidia-nvjitlink-cu12==12.4.99 nvidia-nvtx-cu12==12.1.105 ProDy==2.4.1 pyparsing==3.1.1 scipy==1.12.0 sympy==1.12 torch==2.2.1 triton==2.2.0 typing_extensions==4.10.0 ml-collections==0.1.1 dm-tree==0.1.8