Commit Graph

3 Commits

Author SHA1 Message Date
704f048c59 Reduce resource requirements to 2 cpus / 8GB memory for k8s compatibility 2026-03-30 21:18:14 +01:00
bf04f8971e Configure foldseek pipeline for WES execution
- Update container image to harbor.cluster.omic.ai/omic/foldseek:latest
- Update default paths to /omic/eureka/foldseek/ PVC mount paths
- Add k8s profile with eureka-pvc storage
- Remove stageInMode copy and containerOptions for k8s compatibility
- Update params.json defaults to s3://omic/eureka/foldseek/ paths
2026-03-30 20:54:07 +01:00
ec54fa1c22 Initialize foldseek pipeline for WES 2026-03-30 19:21:29 +01:00