Files
flowdock/Makefile
Olamide Isreal a3ffec6a07
Some checks failed
Code Quality Main / code-quality (push) Has been cancelled
Release Drafter / update_release_draft (push) Has been cancelled
Tests / run_tests_ubuntu (ubuntu-latest, 3.10) (push) Has been cancelled
Tests / run_tests_ubuntu (ubuntu-latest, 3.8) (push) Has been cancelled
Tests / run_tests_ubuntu (ubuntu-latest, 3.9) (push) Has been cancelled
Tests / run_tests_macos (macos-latest, 3.10) (push) Has been cancelled
Tests / run_tests_macos (macos-latest, 3.8) (push) Has been cancelled
Tests / run_tests_macos (macos-latest, 3.9) (push) Has been cancelled
Tests / run_tests_windows (windows-latest, 3.10) (push) Has been cancelled
Tests / run_tests_windows (windows-latest, 3.8) (push) Has been cancelled
Tests / run_tests_windows (windows-latest, 3.9) (push) Has been cancelled
Tests / code-coverage (push) Has been cancelled
Initial commit: FlowDock pipeline configured for WES execution
2026-03-16 15:23:29 +01:00

31 lines
764 B
Makefile

help: ## Show help
@grep -E '^[.a-zA-Z_-]+:.*?## .*$$' $(MAKEFILE_LIST) | awk 'BEGIN {FS = ":.*?## "}; {printf "\033[36m%-30s\033[0m %s\n", $$1, $$2}'
clean: ## Clean autogenerated files
rm -rf dist
find . -type f -name "*.DS_Store" -ls -delete
find . | grep -E "(__pycache__|\.pyc|\.pyo)" | xargs rm -rf
find . | grep -E ".pytest_cache" | xargs rm -rf
find . | grep -E ".ipynb_checkpoints" | xargs rm -rf
rm -f .coverage
clean-logs: ## Clean logs
rm -rf logs/**
format: ## Run pre-commit hooks
pre-commit run -a
sync: ## Merge changes from main branch to your current branch
git pull
git pull origin main
test: ## Run not slow tests
pytest -k "not slow"
test-full: ## Run all tests
pytest
train: ## Train the model
python flowdock/train.py