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flowdock/configs/hparams_search/combined_optuna.yaml
Olamide Isreal a3ffec6a07
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Initial commit: FlowDock pipeline configured for WES execution
2026-03-16 15:23:29 +01:00

51 lines
1.7 KiB
YAML

# @package _global_
# example hyperparameter optimization of some experiment with Optuna:
# python train.py -m hparams_search=mnist_optuna experiment=example
defaults:
- override /hydra/sweeper: optuna
# choose metric which will be optimized by Optuna
# make sure this is the correct name of some metric logged in lightning module!
optimized_metric: "val/loss"
# here we define Optuna hyperparameter search
# it optimizes for value returned from function with @hydra.main decorator
# docs: https://hydra.cc/docs/next/plugins/optuna_sweeper
hydra:
mode: "MULTIRUN" # set hydra to multirun by default if this config is attached
sweeper:
_target_: hydra_plugins.hydra_optuna_sweeper.optuna_sweeper.OptunaSweeper
# storage URL to persist optimization results
# for example, you can use SQLite if you set 'sqlite:///example.db'
storage: null
# name of the study to persist optimization results
study_name: null
# number of parallel workers
n_jobs: 1
# 'minimize' or 'maximize' the objective
direction: minimize
# total number of runs that will be executed
n_trials: 20
# choose Optuna hyperparameter sampler
# you can choose bayesian sampler (tpe), random search (without optimization), grid sampler, and others
# docs: https://optuna.readthedocs.io/en/stable/reference/samplers.html
sampler:
_target_: optuna.samplers.TPESampler
seed: 1234
n_startup_trials: 10 # number of random sampling runs before optimization starts
# define hyperparameter search space
params:
model.optimizer.lr: interval(0.0001, 0.1)
data.batch_size: choice(2, 4, 8, 16)
model.net.hidden_dim: choice(64, 128, 256)