Initial commit: FlowDock pipeline configured for WES execution

2026-03-16 15:23:29 +01:00
commit a3ffec6a07
116 changed files with 16139 additions and 0 deletions
--- a/.env.example
+++ b/.env.example
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+# example of file for storing private and user specific environment variables, like keys or system paths
+# rename it to ".env" (excluded from version control by default)
+# .env is loaded by train.py automatically
+# hydra allows you to reference variables in .yaml configs with special syntax: ${oc.env:MY_VAR}
+
+PLINDER_MOUNT="$(pwd)/data/PLINDER"