21 lines
537 B
Plaintext
21 lines
537 B
Plaintext
nextflow.enable.dsl=2
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process DEBUG {
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container 'harbor.cluster.omic.ai/omic/digital-patients/synthea:cudf'
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script:
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"""
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echo "MOUNT_CHECK"
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mount | grep omic || echo "no omic mounts"
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echo "---"
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ls /omic/ 2>&1
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echo "---"
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ls /omic/eureka/ 2>&1 | head -20
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echo "---"
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ls /omic/eureka/digital-patients/ 2>&1 | head -20
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echo "---"
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echo "WRITE_TEST"
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mkdir -p /omic/eureka/digital-patients/test_dir 2>&1 && echo "MKDIR_OK" || echo "MKDIR_FAIL"
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echo "END"
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"""
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}
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workflow { DEBUG() }
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