Large reference/model files excluded from repo - to be staged to S3 or baked into Docker images.
8 lines
332 B
Plaintext
8 lines
332 B
Plaintext
add rna splice step
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fix borzoi - muatation step (main_borzoi;PREDICT_EXPRESSION;create_mut()) onyl POINT MUTATIONS add INDEL MUATAIONS
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Borzoi can have alternativ chromosoms and chrUn_* as well, VCF2PROT CAN NOT have them. This will cause discrepancies in the code.
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Name output files from borzoi ==> need to have patients name/id
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