manifest {
    name                = 'digital-patients'
    author              = 'omic'
    recurseSubmodules   = true
    homePage            = 'https://trs-gitea.cluster.omic.ai/omic/digital-patients'
    description         = 'generative digital patients and multi-omics pipeline'
    mainScript          = 'main.nf'
    nextflowVersion     = '!>=21.04.3'
    defaultBranch       = 'main'
}

profiles {
    standard {
        docker {
            enabled = true
            temp = 'auto'
        }
    }

    k8s_gpu {
        process {
            executor = 'k8s'
            pod = [[nodeSelector: 'nvidia.com/gpu.present=true']]
            accelerator = [request: 1, type: 'nvidia.com/gpu']
        }
        docker {
            enabled = true
        }
        k8s {
            storageClaimName = 'eureka-pvc'
            storageMountPath = '/omic/eureka'
        }
    }

    k8s {
        process {
            executor = 'k8s'
        }
        docker {
            enabled = true
        }
        k8s {
            storageClaimName = 'eureka-pvc'
            storageMountPath = '/omic/eureka'
        }
    }
}