apiVersion: batch/v1
kind: Job
metadata:
  name: job-data-copy-digital-patient-node-to-pvc
  namespace: bioinformatics
spec:
  backoffLimit: 6
  completionMode: NonIndexed
  completions: 1
  manualSelector: false
  parallelism: 1
  suspend: false
  template:
    spec:
      containers:
      - args:
        - |
          apk add --no-cache rsync
          mkdir -p /target
          rsync -av --exclude .git/ --exclude .git-old/ --exclude work/ /source/ /target/digital-patient-data
        command:
        - /bin/sh
        - -c
        image: alpine
        imagePullPolicy: Always
        name: data-copy
        resources: {}
        terminationMessagePath: /dev/termination-log
        terminationMessagePolicy: File
        volumeMounts:
        - mountPath: /source
          name: k8s-node
        - mountPath: /target
          name: pvc-volume
      dnsPolicy: ClusterFirst
      nodeSelector:
        kubernetes.io/hostname: k8s-node23
      restartPolicy: Never
      schedulerName: default-scheduler
      securityContext: {}
      terminationGracePeriodSeconds: 30
      tolerations:
      - effect: NoExecute
        key: omic-app
        operator: Equal
        value: similarity-search
      volumes:
      - name: pvc-volume
        persistentVolumeClaim:
          claimName: dreamdock-data
      - hostPath:
          path: /data/bugra/digital_patient  ## CHANGE ME
          type: ""
        name: k8s-node