nextflow.enable.dsl=2
process DEBUG {
    container 'harbor.cluster.omic.ai/omic/digital-patients/synthea:cudf'
    script:
    """
    echo "PWD: \$(pwd)"
    echo "=== /omic/eureka/ ==="
    ls /omic/eureka/ 2>&1 | head -20
    echo "=== /omic/eureka/digital-patients/ ==="
    ls -la /omic/eureka/digital-patients/ 2>&1 | head -30
    echo "=== /omic/eureka/digital-patients/imputed/ ==="
    ls -la /omic/eureka/digital-patients/imputed/ 2>&1 | head -20
    echo "=== /omic/eureka/digital-patients/healthy/ ==="
    ls -la /omic/eureka/digital-patients/healthy/ 2>&1 | head -20
    echo "=== /omic/eureka/digital-patients/supporting-data/ ==="
    ls -laR /omic/eureka/digital-patients/supporting-data/ 2>&1 | head -30
    echo "=== Test write ==="
    echo "test" > /omic/eureka/digital-patients/write_test.txt && echo "WRITE OK" || echo "WRITE FAILED"
    echo "DONE"
    """
}
workflow { DEBUG() }