45 lines
1016 B
Plaintext
Executable File
45 lines
1016 B
Plaintext
Executable File
docker {
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enabled = true
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}
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process {
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container = 'harbor.cluster.omic.ai/omic/chai1:v3'
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memory = '32 GB'
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cpus = 4
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}
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profiles {
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standard {
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docker {
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temp = 'auto'
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runOptions = '--gpus all'
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}
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}
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k8s {
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process {
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executor = 'k8s'
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}
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k8s {
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storageClaimName = 'omic-reference'
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storageMountPath = '/mnt/hdd/server-nfs/omic-reference'
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namespace = 'nextflow'
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serviceAccount = 'nextflow'
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}
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}
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k8s_gpu {
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process {
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executor = 'k8s'
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pod = [[nodeSelector: 'nvidia.com/gpu.present=true'], [env: 'NVIDIA_VISIBLE_DEVICES', value: 'all']]
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accelerator = [request: 1, type: 'nvidia.com/gpu']
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}
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k8s {
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storageClaimName = 'omic-reference'
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storageMountPath = '/mnt/hdd/server-nfs/omic-reference'
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namespace = 'nextflow'
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serviceAccount = 'nextflow'
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}
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}
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}
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