Pin transformers<4.45 and use v3 tag to ensure K8s pulls the corrected image with working EsmModel imports. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
45 lines
964 B
Plaintext
Executable File
45 lines
964 B
Plaintext
Executable File
docker {
|
|
enabled = true
|
|
}
|
|
|
|
process {
|
|
container = 'harbor.cluster.omic.ai/omic/chai1:v3'
|
|
memory = '32 GB'
|
|
cpus = 4
|
|
}
|
|
|
|
profiles {
|
|
standard {
|
|
docker {
|
|
temp = 'auto'
|
|
runOptions = '--gpus all'
|
|
}
|
|
}
|
|
|
|
k8s {
|
|
process {
|
|
executor = 'k8s'
|
|
}
|
|
k8s {
|
|
storageClaimName = 'eureka-pvc'
|
|
storageMountPath = '/omic/eureka'
|
|
namespace = 'nextflow'
|
|
serviceAccount = 'nextflow'
|
|
}
|
|
}
|
|
|
|
k8s_gpu {
|
|
process {
|
|
executor = 'k8s'
|
|
pod = [[nodeSelector: 'nvidia.com/gpu.present=true'], [env: 'NVIDIA_VISIBLE_DEVICES', value: 'all']]
|
|
accelerator = [request: 1, type: 'nvidia.com/gpu']
|
|
}
|
|
k8s {
|
|
storageClaimName = 'eureka-pvc'
|
|
storageMountPath = '/omic/eureka'
|
|
namespace = 'nextflow'
|
|
serviceAccount = 'nextflow'
|
|
}
|
|
}
|
|
}
|