Commit Graph

2 Commits

Author SHA1 Message Date
8bb6720fc1 Add k8s and k8s_gpu profiles for WES execution
WES runs Nextflow with -profile k8s_gpu for GPU workloads.
Profiles configure K8s executor, GPU node selector, and
eureka-pvc storage claim for data access.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-16 15:34:52 +01:00
f971fd0e21 Initial commit: Chai-1 protein structure prediction pipeline for WES
- Nextflow pipeline using chai1 Docker image from Harbor
- S3-based input/output paths (s3://omic/eureka/chai-lab/)
- GPU-accelerated protein folding with MSA support

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-16 12:55:08 +01:00