Initial commit: Chai-1 protein structure prediction pipeline for WES

- Nextflow pipeline using chai1 Docker image from Harbor
- S3-based input/output paths (s3://omic/eureka/chai-lab/)
- GPU-accelerated protein folding with MSA support

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
This commit is contained in:
2026-03-16 12:55:08 +01:00
commit f971fd0e21
26 changed files with 1289 additions and 0 deletions

4
.gitignore vendored Normal file
View File

@@ -0,0 +1,4 @@
output/
work/
.nextflow/
.nextflow.log*