diff --git a/main.nf b/main.nf index 9989703..af469d1 100755 --- a/main.nf +++ b/main.nf @@ -3,15 +3,16 @@ nextflow.enable.dsl=2 params.input_dir = 's3://omic/eureka/chai1/input' params.outdir = 's3://omic/eureka/chai1/output' -params.use_msa = true +params.use_msa = false params.msa_server = 'https://api.colabfold.com' -params.num_samples = 5 +params.num_samples = 1 process CHAI1 { container 'harbor.cluster.omic.ai/omic/chai1:v3' publishDir params.outdir, mode: 'copy' stageInMode 'copy' maxForks 1 + errorStrategy 'ignore' input: path fasta