diff --git a/main.nf b/main.nf index 7b8d6c1..e442b72 100755 --- a/main.nf +++ b/main.nf @@ -1,8 +1,8 @@ #!/usr/bin/env nextflow nextflow.enable.dsl=2 -params.input_dir = 's3://omic/eureka/chai-lab/input' -params.outdir = 's3://omic/eureka/chai-lab/output' +params.input_dir = 's3://omic/eureka/chai1' +params.outdir = 's3://omic/eureka/chai1/output' params.use_msa = true params.msa_server = 'https://api.colabfold.com' params.num_samples = 5 diff --git a/params.json b/params.json index 569194a..7335633 100755 --- a/params.json +++ b/params.json @@ -3,12 +3,12 @@ "input_dir": { "type": "folder", "description": "Directory containing FASTA files and optional restraints", - "default": "s3://omic/eureka/chai-lab/input", + "default": "s3://omic/eureka/chai1", "required": true, "pipeline_io": "input", "var_name": "params.input_dir", "examples": [ - "s3://omic/eureka/chai-lab/input" + "s3://omic/eureka/chai1" ], "pattern": ".*", "enum": [], @@ -18,12 +18,12 @@ "outdir": { "type": "folder", "description": "Directory for chai1 prediction results", - "default": "s3://omic/eureka/chai-lab/output", + "default": "s3://omic/eureka/chai1/output", "required": true, "pipeline_io": "output", "var_name": "params.outdir", "examples": [ - "s3://omic/eureka/chai-lab/output" + "s3://omic/eureka/chai1/output" ], "pattern": ".*", "enum": [],